[Biopython] Write IncRNA Output with Biopython

Peter Cock p.j.a.cock at googlemail.com
Thu Oct 31 13:03:01 UTC 2019


Ah - I see now that you'd tried sending a version of this email with a
screenshot (which got held for moderation), which gave a hint of the
output - but my questions remain.

Peter

On Thu, Oct 31, 2019 at 1:00 PM Peter Cock <p.j.a.cock at googlemail.com> wrote:
>
> What's an IncRNA list in this context? Do you have an example input
> FASTA file, and the desired output?
>
> The Biopython Tutorial covers parsing FASTA sequences files (and other formats):
>
> http://biopython.org/DIST/docs/tutorial/Tutorial.html
>
> Peter
>
> On Thu, Oct 31, 2019 at 2:07 AM Zirui Zhou <zirui at vt.edu> wrote:
> >
> > Dear All,
> >
> > I am looking for help for a python script through JupyterNotebook.
> >
> > Its function is to use protein fasta file to output IncRNA list.
> > I really do not have an idea about how to do it. I would more than appreciate it if you could help me with it.
> > Thanks a lot.
> > Best,
> >
> > --
> > Zirui Zhou
> > Ph.D. Student
> > Department of Chemical Engineering
> > 392 Goodwin Hall, Virginia Tech
> > _______________________________________________
> > Biopython mailing list  -  Biopython at mailman.open-bio.org
> > https://mailman.open-bio.org/mailman/listinfo/biopython


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