[Biopython] [PATCH] Use https:// instead of git:// in examples
Adam Sjøgren
asjo at koldfront.dk
Fri Oct 4 12:23:26 UTC 2019
Peter writes:
>> I can provide a publicly available git repository to pull from instead,
>> if that is easier than "git am".
> I personally could work with that - probably easier as I've never
> needed "git am" before.
Ok, here is a repo with the patch applied:
· https://koldfront.dk/git/biopython.github.io/
>> What I would usually do is to use "PYTHONPATH=path/to/checkout/of/library python"
>> while experimenting/developing, but this failed with a warning and an
>> error about something that couldn't be linked¹.
> Probably that would only work with pure Python code, compiled C
> extensions are more fragile.
Ah, ok, makes sense.
>> How do you do development - do you make your changes and go through
>> "python setup.py install" before trying them out?
> Using pip for a development installation (where if you change a Python file,
> it is live next time something imports the library):
>
> $ pip install -e .
>
> There was an equivalent with $ python setup.py install ... but I forget
> the switch right now.
Thanks, I will give it a go (I'm using a shared virtual environment that
I don't want to "pollute", which may be complicating things for me).
Best regards,
Adam
--
"I need someone to throw blue sky at me" Adam Sjøgren
asjo at koldfront.dk
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