[Biopython] EMBL DNA records with locations referencing other sequences
Peter Cock
p.j.a.cock at googlemail.com
Fri Nov 8 16:58:16 UTC 2019
Pull request done:
https://github.com/biopython/biopython/pull/2334
Do you happen to have a good biologically interesting example which
would be good for the documentation? The ones on issue 808 are
complicated by the fact the annotated protein sequence does not
match the conceptual translation (RNA editing etc).
https://github.com/biopython/biopython/issues/808
Peter
On Thu, Nov 7, 2019 at 6:41 PM Adam Sjøgren <asjo at koldfront.dk> wrote:
>
> Peter writes:
>
> > Having a look at this now - one minor style point on the tests, you could
> > use assertRaisesRegexp here (aka assertRaisesRegex in modern Python):
> >
> > https://github.com/biopython/biopython/issues/2273
>
> Thanks for the pointer - I think I just aped after another test.
>
> > Do you have any objection to me putting this up as a branch on my GitHub
> > fork, adding some tweaks, and turning it into a pull request?
>
> Please do, no objections from me - I'm a beginner in Python, so the more
> you improve it, the happer I am; thanks!
>
>
> Best regards,
>
> Adam
>
> --
> "Please don't "meh" the panopticon. You are Adam Sjøgren
> not making things better by doing that." asjo at koldfront.dk
>
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