[Biopython] gff3 file
二师兄♠
bsmagic at qq.com
Thu Jun 4 08:57:12 UTC 2015
Try senior text editor, like ultraedit, notepad++, which could display the tabs.
------------------ Original ------------------
From: "Peter Cock";<p.j.a.cock at googlemail.com>;
Date: Thu, Jun 4, 2015 03:40 PM
To: "Atteyet-Alla.Yassin"<Atteyet-Alla.Yassin at ukb.uni-bonn.de>;
Cc: "Biopython Mailing List"<Biopython at mailman.open-bio.org>;
Subject: Re: [Biopython] gff3 file
On Wed, Jun 3, 2015 at 2:35 PM, Atteyet-Alla.Yassin
<Atteyet-Alla.Yassin at ukb.uni-bonn.de> wrote:
> Hallo Peter,
>
> many many thanks it work now. But I have only a small problem. As you see
> from the table the tabs are inconsistent with one another. Is there a
> possibility to solve this problem?
>
> Seqname Source feature Start End Score Strand Frame
> Attributes
> CP008802 GenBank gene 417 638 0,000000 1 . locus_tag
> "FB03_00010"; transcript_id "FB03_00010"
> CP008802 GenBank gene 814 2193 0,000000 -1 .
> locus_tag "FB03_00015"; transcript_id "FB03_00015"
> CP008802 GenBank gene 2407 3408 0,000000 -1 .
> locus_tag "FB03_00020"; transcript_id "FB03_00020"
>
>
The display of tabs in emails or plain text editors is always a bit
confusing. It probably just looks odd. Try opening the tabular file in
something like Excel?
Peter
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