[Biopython] Using Phylo to draw trees with images in nodes

Jaime Tovar jmtc21 at bath.ac.uk
Fri Oct 17 15:42:16 UTC 2014


Linux, x64.

Thanks,

Jaime.

On 17/10/2014 16:40, Chris Friedline wrote:
> What OS?
>
> --
> Christopher J. Friedline, Ph.D.
> NSF Postdoctoral Research Fellow
> Virginia Commonwealth University
> Richmond, VA 23284
> http://chris.friedline.net
>
>
>
>
>> On Oct 17, 2014, at 11:09 AM, Jaime Tovar <jmtc21 at bath.ac.uk> wrote:
>>
>> Hi Chris,
>>
>> Yes, I want to limit everything to be pip installable... and PyQt4 is
>> not cooperating. Seems there is no workaround for that one. But I'm open
>> to suggestions :)
>>
>> Thanks!
>>
>> Jaime.
>>
>> On 17/10/14 15:26, Chris Friedline wrote:
>>> Hi Jaime,
>>>
>>> ETE2 is probably the way you want to go here. What problems with dependencies are you having?  Qt?
>>>
>>> Chris
>>>
>>> --
>>> Christopher J. Friedline, Ph.D.
>>> NSF Postdoctoral Research Fellow
>>> Virginia Commonwealth University
>>> Richmond, VA 23284
>>> http://chris.friedline.net
>>>
>>>
>>>
>>>
>>>> On Oct 17, 2014, at 9:05 AM, Jaime Tovar <jmtc21 at bath.ac.uk> wrote:
>>>>
>>>> Hi all,
>>>>
>>>> Sorry, seems my google fu is low today. Have been trying to find information about a way to add small images next to the species names in trees generated with Biopython/Phylo. But I'm not even sure it is possible. I want to do something in the likes of trees produced with ETE2. I can't use ETE2 because of problems with the dependencies :(.
>>>>
>>>> Thanks in advance for any help!
>>>>
>>>> Jaime.
>>>> _______________________________________________
>>>> Biopython mailing list  -  Biopython at mailman.open-bio.org
>>>> http://mailman.open-bio.org/mailman/listinfo/biopython



More information about the Biopython mailing list