[Biopython] Generating high seq similar lists
George Devaniranjan
devaniranjan at gmail.com
Mon Sep 30 16:02:41 UTC 2013
Hi,
Not directly related to biopython but I am trying to use biopython to
generate a substitution matrix.
I was looking for a list of PDB, with high sequence similarity (>75%) but
less than 90%-so something like that at 1.6A or better resolution to create
my own substitution matrix.
I looked at http://dunbrack.fccc.edu/PISCES.php
But I cannot specify a range for the sequence similarity, any other way I
can get a similar list?
Thank you,
George
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