[Biopython] Using bioPython and bioSQL

[Animesh Agrawal]

Hi Peter,Thanks a lot for your reply.Yes I want web interface and I need it to be read only. I'll check out GBrowse and CHADO.
Cheers,
Animesh

On 10/06/11, Peter Cock  <p.j.a.cock at googlemail.com> wrote:
> On Thu, Oct 6, 2011 at 11:25 AM, Animesh Agrawal
> <animesh.agrawal at anu.edu.au> wrote:
> > Hi All,I am trying to develop a interface for a local sequence depository
> > in my lab. Using biopython cookbook examples I have been able to
> > populate the database. But to query the database I want to create an
> > interface so all other members in my lab can access it. I have no
> > experience in doing this kind of development. I need some advice
> > on best way of doing it and if there are already developed modules
> > in biopython which can help me in attaining my objectives.
> > Cheers
> > Animesh
> 
> Hi Animesh,
> 
> Do you mean some kind of web interface? Would you just need
> this to be read only?
> 
> You can use GBrowse with BioSQL, but I believe CHADO is better
> supported as the schema. CHADO is also a better choice if you
> want users to be able to edit the annotation.
> http://gmod.org/wiki/Chado_-_Getting_Started
> 
> Peter
> 
>