[Biopython] zero-length feature
Anne Pajon
ap12 at sanger.ac.uk
Mon Mar 22 11:24:43 UTC 2010
Hi Peter,
Here is the feature location string I would like to achieve in the
EMBL output:
FT gap 422950..422950
FT /estimated_length=1
Regards,
Anne.
On 22 Mar 2010, at 09:31, Peter wrote:
> On Fri, Mar 19, 2010 at 7:19 PM, Anne Pajon <ap12 at sanger.ac.uk> wrote:
>> Dear,
>>
>> I am having trouble writing out EMBL file for feature of size one.
>> I've modified InsdcIO.py to fit my need. Because when I try to
>> submit my
>> file to EMBL, it comes back with this comment: badly formatted -- you
>> need a .. between locations.
>
> Hi Anne,
>
> Could you show us the feature location string you are trying to
> achieve in the EMBL output? That would help me to follow -
> an example FT entry would be great.
>
> Peter
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Dr Anne Pajon - Pathogen Genomics, Team 81
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