[Biopython] sequence coordinate mapping
Reece Hart
reece at berkeley.edu
Fri Jun 18 18:00:20 UTC 2010
Thanks, all, for feedback. I'm still digesting some of the previous
comments. For the purposes of discussion, I've attached the crude
(pre-crude, even) implementation that I mentioned.
Caveats/ToDos:
* The interface is sufficient for my needs, but for a large number of
CDS subfeatures, it might make sense to change the implementation index
rather than linear search.
* I ignore strand for the moment.
* I don't use SeqFeature.AbstractPosition and friends.
-Reece
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