[Biopython] NaN values, lowess
    Lysiane Bouchard 
    bouchard.lysiane at gmail.com
       
    Wed Jan 27 18:16:30 UTC 2010
    
    
  
Hi,
I am using the lowess function in Bio.Statistics.lowess, version 1.53
When input array y is zero everywhere, I obtain yest=NaN everywhere.
I wonder if I did something wrong and if other special cases might lead to
NaN values.
------------------------------
-------------------------------------------------------
>>ipython --pylab
>>In [1]: import numpy
>>In [2]: from Bio.Statistics.lowess import lowess
>>In [3]: x = numpy.array(range(200))*1.0
>>In [4]: y = numpy.zeros([200,])
>>In [5]: yest = lowess(x,y)
>>In [6]: all(isnan(yest))
>>Out[6]: True
 -----------------------------------------------------------------------------------
Thank you,
Lysiane Bouchard
    
    
More information about the Biopython
mailing list