[Biopython] IPI fetching

Yvan Strahm yvan.strahm at bccs.uib.no
Tue Sep 8 12:01:08 UTC 2009


Hello All,

I have a project with a bunch of IPI access number and need to get their fasta sequence. Now I am 
using the SRS web site to get these sequence.
I found a old thread on Biopython-dev about IPI parseing 
(http://portal.open-bio.org/pipermail/biopython-dev/2001-December/000771.html), so I tried to use 
ExPASy.get_sprot_raw to get the sequence with no luck.

Does anyone know how I can use the IPI accession number directly in Biopython?

Thanks for your help,
cheers,
yvan



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