[BioPython] problems to fetch pdb files from server using pdb_list
Peter
biopython at maubp.freeserve.co.uk
Fri May 23 10:35:59 UTC 2008
Florian Koelling wrote:
> Is there any possibility to avoid the construction of the obselete
> folder? I could not find it in the documentation - and the flags 0, 1
> and None didn' t work
You just use the pdir argument to specify the folder you want to use
(otherwise it build the subdirectory structre). The function will
understand the shorthand of "." for the current directory. Based on
your previous example try:
from Bio.PDB import *
pdbl=PDBList()
pdbl.retrieve_pdb_file('1FAT', pdir=".")
Peter
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