[BioPython] qblast

Michael S. Robeson Michael.Robeson at Colorado.EDU
Sat Aug 18 16:42:22 UTC 2007


I have been using qblast (blastn) for a set of sequences. However, it  
gives me _completely_ different results than if I was to use the web  
interface at NCBI (also using blastn, nr). Is anyone else having this  
problem? Am I missing something?

Can anyone help with making sure that I am using the same settings in  
qblast as with the NCBI web interface?

Also, are there any plans for implementing megablast?

-Thanks!
-Mike



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