[BioPython] Need help parsing Blastoutput

Halima Rabiu halima at mancala.cbio.uct.ac.za
Thu Apr 13 15:07:52 UTC 2006


Hi All,
I have a BLAST output from a local blast
I need to calculate my % alignment coverage as regard to my subject
I try parsed the blast output and wanted to print the
sbjct Start and Sbjct end. but I could not is there anyway I could this 
try to get mach coverage between my querry and subject I dont need 
Identities,but total % alignment for querry or subject.
Thanks
Halimah




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