[BioPython] Having some issue with unicode and Bio.PDB
Michiel De Hoon
mdehoon at c2b2.columbia.edu
Mon Oct 3 11:58:20 EDT 2005
File
"/users2/invites/wong/apps/lib/python2.3/site-packages/Bio/PDB/__init__.py",
line 22, in ?
from Polypeptide import PPBuilder, CaPPBuilder, is_aa, standard_aa_names
File
"/users2/invites/wong/apps/lib/python2.3/site-packages/Bio/PDB/Polypeptide.py
",
line 5, in ?
from Bio.Seq import Seq
File "/users2/invites/wong/apps/lib/python2.3/site-packages/Bio/Seq.py",
line1, in ?
import string, array
ImportError: /users2/invites/wong/apps/lib/python2.4/lib-dynload/array.so:
undefined symbol: PyUnicodeUCS2_FromUnicode
You are mixing python2.3 and python2.4 (see the paths in the traceout). You
should reinstall Biopython with python2.4. From the traceback, it seems that
you have Biopython for python2.3 (or, for some reason, python imports
python2.3's Biopython instead of python2.4's Biopython).
--Michiel.
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