[BioPython] Problem with standalone BLAST

Andreas Schlicker andreasschlicker at web.de
Tue Jun 1 12:32:33 EDT 2004


Hi all

I'm having problems with the "NCBIStandalone.blastall".
After launching the Blast with "doBlast" it runs for a while and then starts
to sleep. However, it never awakes from this state.
I'm having this problem on various platforms:

SunOS 5.9
Python 2.3.3
BioPython 1.24

And:
RedHat 7.3
Python-2.3.4
Numerical Python 23.1
mxTextTools 2.0.5
reportlab 1.19
Biopython 1.30


Can anyone help me?

Thanks in advance.
Andreas



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