[BioPython] performance problem in
ParserSupport.EventGenerator._get_set_flags
Andreas Kuntzagk
andreas.kuntzagk at mdc-berlin.de
Fri Jun 13 12:22:20 EDT 2003
> Thats strange. I checked out a fresh version from CVS into a clean
> directory and the test fails. Does it use something outside the build
> directory?
I still don't fully understand this issue, at least I could locate,
where it fails (to some extend):
The test file is NT_019265.gb, it fails parsing the CONTIG.
GenBank.__init__.location is called whith a content of
CONTIG join(AL391218.9:105173..108462,gap(100),
...
which gets shortened to CONTIGjoin.
Maybe you can use this info.
Andreas
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