[BioPython] On Martel
Jeffrey Chang
jchang at jeffchang.com
Thu Jun 12 23:17:06 EDT 2003
Thanks very much for the code. I have committed it to the repository.
Jeff
On Thursday, June 12, 2003, at 10:07 AM, yu huang wrote:
> Hi everybody,
>
> Andrew Dalke's martel is a great engine for parsing
> bio-format files. Thanks to his creative work.
> Combination with XML is a great strategy.
> And thanks to Jeffrey Chang's instruction (he told me
> what it is for).
>
> I use it to parse the wublast files. A little bug is
> present when processing the files generated by an old
> WuBlast binary (compiled against libc5) and when parse
> the blastp files.
> I've attached the modified code. "diff" will make
> difference apparent.
>
> BioPython great!
>
> =====
> Yu Huang
>
> Life Sciences, Fudan University,
> Shanghai, China, 200433
> 86-021-65643603
>
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