[BioPython] Bio.expressions.blast.wublast

[Jeffrey Chang]

It's an expression for the Martel parser generator that Andrew Dalke  
wrote.  You can use this to parser wublast files with a SAX-like  
interface.  That means that you only need to write handler functions to  
deal with the data that you require.  So if you only need the sequence,  
for example, you only have to write code to pull the sequence out, and  
you can ignore the rest.

Check out the README file for examples on how to use it.
http://biopython.org/~dalke/Martel/README.txt

Jeff




On Wednesday, April 9, 2003, at 12:30  PM, yu huang wrote:

> What is that for?
> (Bio.expressions.blast.wublast)
>
> This module seems can parse a wublast output file into
> an xml file.
> But I don't know how to extract information from that
> xml file easily.
>
> Write all the handlers?
> Not possible.
>
> Would anyone give me a clue?
>
>
> Best regards,
>
> Yu Huang
>
>
>
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