[BioPython] genbank_format.py fix-up
Jay Hesselberth
jhessel@mail.utexas.edu
17 Jul 2002 10:19:51 -0500
I've been parsing viral genbank files, and there's an extra field in the
LOCUS line that screws up the alpha-4 genbank parser. Don't know if
this is already in CVS. Here's the diff:
================================================================
85,87d84
< valid_nucleic_acid_types = ["linear", "circular"]
< nucleic_acid_types = map(Martel.Str, valid_nucleic_acid_types)
<
92c89
<
Martel.Alt(*nucleic_acid_types)))
---
> Martel.Str("circular")))
=================================================================
Enjoy,
Jay
--
________________________________________________
Jay Hesselberth jhessel@mail.utexas.edu
University of Texas (512) 471-6445
2500 Speedway / A4800
Austin, TX 78712