[Biopython-dev] [Biopython] Fw: Developing a wrapper for EBI dbfetch

Peter Cock p.j.a.cock at googlemail.com
Wed Jun 21 11:06:48 UTC 2017


CC biopython-dev for the module naming in particular.

General feedback or ideas about supporting the EBI's web-interface
(their REST API, similar to the NCBI's Entrez utilities, or TogoWS)
are welcome here or on the GitHub issue:

https://github.com/biopython/biopython/issues/443

Peter

On Wed, Jun 21, 2017 at 11:25 AM, Francesco Gastaldello (Staff)
<f.gastaldello at dundee.ac.uk> wrote:
>
> Hi all,
>
> this mail regard the development on my behalf for the dbfetch wrapper. More info on the service are here: http://www.ebi.ac.uk/Tools/dbfetch/dbfetch
>
> There is already an issue on the Biopython GitHub (#443) were me and Peter Cock are discussing how to place the module when it's going to be ready.
>
> He mentioned the possibility to place it in Bio/EBI/__init__.py, but he's concened that this won't comply with PEP8 guidelines.
>
> Any thoughts about it?
>
> Regards,
>
> Francesco
>
> Dbfetch < EMBL-EBI
> www.ebi.ac.uk
> Dbfetch Help. What is dbfetch? Dbfetch is an abbreviation for "database fetch". Dbfetch provides an easy way to retrieve entries from various databases at the EMBL ...


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