[Biopython-dev] Deprecating Bio.PDB.Dice

Peter Cock p.j.a.cock at googlemail.com
Tue Apr 18 12:36:39 UTC 2017


Pull request to do this is here:

https://github.com/biopython/biopython/pull/1166

Issue to reuse the code is here:

https://github.com/biopython/biopython/issues/1167

On Tue, Apr 18, 2017 at 1:29 PM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> Hello all,
>
> This came up in discussion on GitHub issue #820 [*] about turning
> existing self-tests into proper unit tests for user under TravisCI etc.
>
> Bio/PDB/Dice.py is essentially an example of how to write your
> own selector for use with PDBIO to write a subset of a PDB file.
>
> We are proposing to formally deprecate Bio.PDB.Dice (and later
> remove it [**]), and ideally reuse this as an example script and/or
> test case.
>
> If anyone is using the Dice module, please let us know.
>
> Thank you,
>
> Peter
>
> [*] https://github.com/biopython/biopython/issues/820
> [**] http://biopython.org/wiki/Deprecation_policy


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