[Biopython-dev] A modification to BioSQL

Peter Cock p.j.a.cock at googlemail.com
Thu Jun 25 14:48:56 UTC 2015


Thanks Brian, I've applied Conner's change to the master,
https://github.com/biopython/biopython/pull/366

Perhaps we should remove the default source term, but on the other
hand it seems harmless to leave it for backward compatibility.

Peter

On Wed, Jun 24, 2015 at 6:10 PM, Brian Osborne <bosborne11 at verizon.net> wrote:
> Peter,
>
> ...
>
> So, 2 differences:
>
> - BioPython supplies that default source term, and BioPerl does not
> - Bioperl has source_tag() to help you add a source term
>
> Don’t know about BioRuby, BioJava.
>
> Thanks again,
>
> Brian O.



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