[Biopython-dev] Tutorial problems

Tiago Rodrigues Antao tra at popgen.net
Mon Dec 7 12:51:48 UTC 2015

On Mon, 7 Dec 2015 10:59:11 +0000
Peter Cock <p.j.a.cock at googlemail.com> wrote:

> For any change, preserving the automated testing of the Tutorial
> examples would be vital. However, dealing with dependencies
> here is a big pain (external libraries, external binaries, internet
> connectivity), and the main reason we don't currently test all of
> the tutorial examples.

There are quite a few things that are not being tested right now, and
they are failing (see previous email).

I will have a look at making the notebooks testable.

In any case, I think the tutorial format needs a revamp for modern
times (interestingly I believe it is mostly adding code snippets and,
above all, REMOVING text).


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