[Biopython-dev] Documentation Status

Peter Cock p.j.a.cock at googlemail.com
Fri Oct 17 08:34:13 UTC 2014

Thanks Travis,

RE: https://github.com/biopython/biopython/pull/376

You've done way more than just Bio/Align/* which is great, but will
take a bit longer to review.

As you've noticed many of the modules' doctests are run via the
functional tests and TravisCI - and therefore have to work with
multiple versions of Python (including 2 and 3). Some doctests
would need dependencies so we use a white list in Tests/run_tests.py


On Fri, Oct 17, 2014 at 5:01 AM, Travis Wrightsman <twrig002 at ucr.edu> wrote:
> Pull Request submitted.
> -Travis
> On Tue, Oct 14, 2014 at 10:10 AM, Travis Wrightsman <twrig002 at ucr.edu>
> wrote:
>> I finished translating the obviously labeled epytext doc strings to proper
>> reStructuredText. Now I'm working through each error/warning that the epydoc
>> compiler is spitting out. When I've finished this I'll submit a pull request
>> for you all to review before merging.
>> When it's all merged and done, I can start attempting to compile in
>> Sphinx, just to test.
>> Travis Wrightsman

More information about the Biopython-dev mailing list