[Biopython-dev] TravisCI BioSQL - TypeError: unhashable type: 'bytearray'

Peter Cock p.j.a.cock at googlemail.com
Wed Oct 8 09:29:44 UTC 2014


Issue filed: https://github.com/biopython/biopython/issues/370

For the short term I have stopped installing mysql-connector-python
under TravisCI which means the rest of the tests pass:

https://github.com/biopython/biopython/commit/4d54e46549df2a6cfc9815af38066ede1ce7f280
https://travis-ci.org/biopython/biopython/builds/37373779

>> On Fri, Oct 3, 2014 at 10:53 AM, Wibowo Arindrarto
>> <w.arindrarto at gmail.com> wrote:
>>> Hi Peter,
>>>
>>> I took a brief look at our test dependencies last night and saw that the
>>> mysql python connector was updated sometime last week and it seemed to be
>>> updated around Sept 24th:
>>> https://dev.mysql.com/doc/relnotes/connector-python/en/.
>>>
>>> As a side point, should we also pin external dependencies to specific
>>> versions in our builds?
>>>
>>> Cheers,
>>> Bow

It looks like we need one of the developers to try installing this
new version locally to reproduce and diagnose the error...

Peter


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