[Biopython-dev] [Biopython] Google Summer of Code 2014 - Call for project ideas

Fields, Christopher J cjfields at illinois.edu
Thu Feb 27 16:25:18 UTC 2014


On Feb 27, 2014, at 10:12 AM, Peter Cock <p.j.a.cock at googlemail.com> wrote:

> On Thu, Feb 27, 2014 at 3:50 PM, Leighton Pritchard
> <Leighton.Pritchard at hutton.ac.uk> wrote:
>> I would like to propose further development of the GenomeDiagram
>> module (and maybe the KGML module, if it's incorporated into Biopython)
>> to enable browser-based interactive visualisation, along the lines of Bokeh[1]
>> 
>> [1] http://bokeh.pydata.org/
> 
> I presume you're offering to mentor this - which would be great :)
> 
> Peter
> 
> P.S. The KGML module Leighton's talking about is here:
> https://github.com/biopython/biopython/pull/173
> 
> Leighton's blog posts about this work:
> http://armchairbiology.blogspot.co.uk/2013/01/keggwatch-part-i.html
> http://armchairbiology.blogspot.co.uk/2013/02/keggwatch-part-ii.html
> http://armchairbiology.blogspot.co.uk/2013/02/keggwatch-part-iii.html

I would add that to the wiki, and indicate whether you can mentor it.  Seems like a cool idea!

chris




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