[Biopython-dev] VCF Parsers

[Lenna Peterson]

I believe PyVCF [1] has a Cython implementation.

Cheers,

Lenna

1: https://github.com/jamescasbon/PyVCF


On Mon, Sep 9, 2013 at 5:03 PM, Nigel Delaney <nigel.delaney at outlook.com>wrote:

> Hi Biopython,
>
>
>
> Just wanted to ask quickly if anyone on the biopython team has implemented
> or is implementing vcf parsers.   I have seen a few python written ones but
> they seem to be quite slow, and so am curious if anyone has wrapped a C
> library of some sort.
>
>
>
> Thanks for any help,
>
> Nigel
>
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