[Biopython-dev] Uniprot-GOA parser

Iddo Friedberg idoerg at gmail.com
Thu May 2 16:19:39 UTC 2013


Yes, will do GPAD as well. Need to preserve the others though, due to
legacy.

./I

On Thu, May 2, 2013 at 12:18 PM, Peter Cock <p.j.a.cock at googlemail.com>wrote:

> On Thu, May 2, 2013 at 5:12 PM, Iddo Friedberg <idoerg at gmail.com> wrote:
> > Does anybody have a GOA parser in the works? Currently writing a simple
> > parser for GAF, GPA and GPI formats. Can contribute if there is interest.
> >
> > More on GOA: http://www.ebi.ac.uk/GOA
> >
> > Cheers,
> >
> > Iddo
>
> Hi Iddo,
>
> I see they're now offering GPAD1.1 format (as well? instead?).
> Does targeting that make more sense in the long run?
>
> I know a few people on the list are or were looking at ontology
> support for Biopython... it would be good to add this.
>
> Regards,
>
> Peter
>



-- 
Iddo Friedberg
http://iddo-friedberg.net/contact.html
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