[Biopython-dev] HMMER in SearchIO

Peter Cock p.j.a.cock at googlemail.com
Mon May 28 11:06:40 UTC 2012


Hi Bow,

I've been looking over your GSoC branch, and noticed that for HMMER3
we've only talked about the regular text output. I think that the table output
is also worth supporting (offers one line query query, or one line per
domain). This isn't tab separated but variable spaces to give a fixed
column layout, but should be easier to parse.

Something to think about later on...

Peter



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