[Biopython-dev] providing python code on tandem repeat detectors to Biopython?

Brad Chapman chapmanb at 50mail.com
Fri Mar 23 00:00:17 UTC 2012


Elke;
Welcome and thanks for the e-mail. This sounds like useful
functionality. The first step would be to generalize it and make the
code available on GitHub. This should give folks something concrete to
provide feedback on.

Thanks again,
Brad

> We've been working on sequence tandem repeat detectors during the past
> couple of months in my research lab. A couple of parsers for commonly
> used detectors, and a repeat class (basically an extension to sequence
> alignments) have come up along the way.
> 
> Would there principally be any interest in introducing the code to
> Biopython?



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