[Biopython-dev] Bug in Bio.Blast.NCBIWWW ?

Peter Cock p.j.a.cock at googlemail.com
Wed Jan 25 13:13:59 UTC 2012


On Wed, Jan 25, 2012 at 2:14 AM, Brad Chapman <chapmanb at 50mail.com> wrote:
>
> Micheal;
> Thanks for the e-mail and problem report. For Biopython issues, the best
> approach is to e-mail the development list (cc'ed here). Since it's a
> community project, there are a wide variety of contributors that can
> provide help and expertise.
>
> In this particular case, I am not especially familiar with python 3 as
> I'm still a python 2 user myself. Peter, Eric and other folks have been
> doing a lot of work on this, so hopefully they can confirm or provide
> additional details.
>
> Thanks again,
> Brad

Hi all,

Yes, as you guessed Michael, this is a Python 3 problem. This
should work now - doing something similar to your suggestion:
https://github.com/biopython/biopython/commit/7bd519e68974185c7b489e2415c9ee3b6f1d7ac4

Thanks for the reminder - there are still a few things to fix under
in Biopython under Python 3.

Peter



More information about the Biopython-dev mailing list