[Biopython-dev] SNP data into Biopython

Tiago Antão tiagoantao at gmail.com
Wed May 18 18:45:21 UTC 2011


Hi,

On Wed, May 18, 2011 at 12:37 PM, Sebastian Bassi
<sbassi at clubdelarazon.org> wrote:
> I wonder if would be OK to create a parser for SNP data provided by
> 23andme for Biopython. I could use https://github.com/ngopal/23andMe
> as a base.
> What do you think?

Are you thinking in also using the sql part of that code? I actually
use a similar strategy in my project to parse HapMap data
(interPopula). I just wonder what other people would think about
having SQL code outside Bio.SQL? I personally have no feelings about
it, but I thought I should raise the issue...

Tiago



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