[Biopython-dev] Biopython 1.56 release plans

Peter biopython at maubp.freeserve.co.uk
Fri Nov 5 12:19:27 UTC 2010


On Fri, Nov 5, 2010 at 12:08 PM, Michiel de Hoon <mjldehoon at yahoo.com> wrote:
> I'd like to suggest also that we deprecate Bio.Prosite.Prodoc; this
> functionality moved to Bio.ExPASy.Prodoc at least since release 1.50,
> and the module has been labeled as obsolete since then. The enclosing
> module Bio.Prosite itself is already deprecated.

Since Bio.Prosite is deprecated that means Bio.Prosite.Prodoc (and any
other child modules) is too. If you try "from Bio.Prosite import Prodoc"
you get a deprecation warning. Feel free to add "(DEPRECATED)" to
the Bio.Prosite.Prodoc docstrings if you think it would be clearer.

Peter



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