[Biopython-dev] subprocess and calling application wrappers

Peter biopython at maubp.freeserve.co.uk
Mon Jul 26 16:08:10 UTC 2010


On Mon, Jul 26, 2010 at 4:12 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
> On Fri, Jul 23, 2010 at 12:48 PM, Brad Chapman <chapmanb at 50mail.com> wrote:
>> Peter;
>>
>> [Simplified interface for calling commandline programs]
>> ...
>>
>> Awesome to see this going in,
>> Brad
>
> It is in now, I cherry-picked the changes I'd made on the app-exec3 branch
> (seemed a bit silly to do a merge for a little thing like this and make the
> history even more confusing).
>
> I haven't updated the tutorial yet...

I have updated the tutorial now - note that this just uses the default __call__
functionality, for simplicity I am avoiding mentioning the optional arguments
(they are covered in the docstring of course).

Peter



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