[Biopython-dev] sff file

Peter biopython at maubp.freeserve.co.uk
Thu Oct 29 17:31:14 UTC 2009


On Thu, Oct 29, 2009 at 2:09 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
>
> I meant the docstrings in Bio/SeqIO/SffIO.py (i.e. the comments
> which get exposed as the API help).
> ...
> I think I need to remove the word "there" from that paragraph ;)
>

That typo is fixed, and I have also added a docstring/doctest example
showing how to do simple primer trimming of an SFF file giving a new
SFF file where the clipping co-ordinates have been updated. Some of
these examples will probably get moved into the tutorial if/when I
merge this to the trunk.

Peter



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