[Biopython-dev] sff file

Peter biopython at maubp.freeserve.co.uk
Mon Oct 26 17:16:01 UTC 2009

On Mon, Oct 26, 2009 at 4:48 PM, Sebastian Bassi
<sbassi at clubdelarazon.org> wrote:
> On Mon, Oct 26, 2009 at 1:14 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
>> I have some on my SFF branch (under Tests/Roche):
>> http://github.com/peterjc/biopython/tree/index
> Thank you very much.
> Just for the record, the URL of the file is:
> http://github.com/peterjc/biopython/raw/index/Tests/Roche/E3MFGYR02_random_10_reads.sff

If you want a general example, that is a good choice.  It is an unmodified file
created by the Roche tools containing just 10 random reads. The folder also
contains FASTA and QUAL files (with and without trimming), as converted
by the Roche tools.

Additionally I have some extra SFF files which are a little less typical...


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