[Biopython-dev] Pfam24/HMMER3 (and GO terms...)

Peter biopython at maubp.freeserve.co.uk
Mon Oct 19 19:02:56 UTC 2009

On Mon, Oct 19, 2009 at 6:46 PM, Kyle Ellrott <kellrott at gmail.com> wrote:
> I've started as a close re-write the the original PfamScan script to
> make sure the python script works equivalently to the original.  Now
> that it works (for basic tests), I will begin by putting better data
> interfaces.  The Bio.Pfam.HMM module should as a HMMER3 module work by
> itself.  But it needs some examples, and probably some work on making
> the interface more clean.  We could also move the code to Bio.HMMER,
> rather than having it as a sub modules of Bio.Pfam.

That sounds good.


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