[Biopython-dev] [Bug 2880] test_Mafft_tool.py unit test failure

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Jul 21 19:56:12 UTC 2009


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED

------- Comment #6 from biopython-bugzilla at maubp.freeserve.co.uk  2009-07-21 15:56 EST -------
(In reply to comment #5)
> I've retitled the bug to focus on the MAFFT issue. This may well be
> a problem with your old version of MAFFT - I know for example the
> the FASTA output is broken on some versions of MAFFT.

I was able to install MAFFT v6.240 on another machine, and worked
out a simple fix. Basically this version produced a different CLUSTAL
style header line. Should be fixed in CVS now.

Thanks for the report,


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