[Biopython-dev] [Bug 2729] New: Importing Bio.SeqUtils before importing pylab gives a "Bus Error"

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Fri Jan 9 15:59:40 UTC 2009


           Summary: Importing Bio.SeqUtils before importing pylab gives a
                    "Bus Error"
           Product: Biopython
           Version: 1.49
          Platform: Macintosh
        OS/Version: Mac OS
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: stephan_schiffels at mac.com

I use the newest cvs version of biopython (2009 Jan 09) and matplotlib 0.90.0
The following two lines crash:

import Bio.SeqUtils
import pylab

I nailed down the problem to lines 122 through 125 in Bio/SeqUtils/__init__.py.
Commenting out these four lines SOLVES the bug for me, since I don't use the
graphics-functions in the SeqUtils package


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