[Biopython-dev] [Bug 2629] New: Updated Bio.NaiveBayes to listfns import

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2629

           Summary: Updated Bio.NaiveBayes to listfns import
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: enhancement
          Priority: P4
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: bsouthey at gmail.com


I have attempted to modify Bio/NaiveBayes.py to remove the dependency on
Bio.listfns functions. Also, made use of the numpy namespace rather than using
'from numpy import *'.

Also, I made a testing file with two examples, the car data is not mine but has
a worked example and the other is Fisher's iris data. Fisher's data is not
really appropriate because it has continuous data and Bio.NaiveBayes only
handles discrete data.


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