[Biopython-dev] [Bug 2622] Parsing between position locations like 5933^5934 in GenBank/EMBL files

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Nov 5 13:12:28 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2622


chapmanb at 50mail.com changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|ASSIGNED                    |RESOLVED
         Resolution|                            |FIXED




------- Comment #4 from chapmanb at 50mail.com  2008-11-05 08:12 EST -------
Fixed with Bio/GenBank/__init__.py 1.93, Bio/SeqFeature.py 1.14.

Coordinates are now passed correctly with Peter's suggested fix. The empty
slice issue is resolved by adding this as a special case to FeatureLocation
nofuzzy attribute retrieval. For standard retrieval the classes are fully
available to the user and they would need to make the distinction about how
they would like to treat them.


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