[Biopython-dev] [Bug 2503] An error when parsing NCBIWWW Blast output

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sat May 24 12:25:59 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2503





------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-24 08:25 EST -------
We need more information.

Could you show us the example code that causes this problem?  

If you are trying to parse a file (e.g. from standalone blast), could attach it
to this bug?

For the look of the stack trace, you are trying to parse the HTML output from
blast (?).  We do recommend parsing the XML output if possible (not the plain
text or HTML output).

Thank you,
Peter.


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