[Biopython-dev] [Bug 2502] PSIBlastParser fails with blastpgp 2.2.18 though works with blastpgp 2.2.15

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Fri May 23 15:25:19 UTC 2008


------- Comment #12 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-23 11:25 EST -------
You are right - it is the extra reference which was causing the failure.

I've checked in a fix to Bio/Blast/NCBIStandalone.py with CVS revision 1.72

Could you update your Biopython installation to CVS and retest?  Or just
replace /home/mortiz/Progs//lib/python/Bio/Blast/NCBIStandalone.py with
revision 1.72 from the ViewCVS website once its updated:

(I haven't closed this bug yet - I'd like your confirmation that this fixes
things, adding a new test case would probably be wise.)

Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.

More information about the Biopython-dev mailing list