[Biopython-dev] [Bug 2475] BioSQL.Loader should reuse existing taxon entries in lineage

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Mar 31 23:23:46 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2475





------- Comment #7 from ericgibert at yahoo.fr  2008-03-31 19:23 EST -------
Created an attachment (id=891)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=891&action=view)
refactoring and search by name

Please discard previous attachment. This newer version includes a static method
returning a list of Taxonomy based on a scientific name.

It is then possible to test the len of the return list: 
0 for no match, 1 for a unique taxon, more if ambiguity.
Ambiguity can be cleared using the get_taxon_by_rank("order") for example.


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