[Biopython-dev] [Bug 2530] Bio.Seq.translate() treats invalid codons as stops

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sat Jun 28 20:39:45 UTC 2008


------- Comment #2 from biopython-bugzilla at maubp.freeserve.co.uk  2008-06-28 16:39 EST -------
Actually there is a unit test, test_translate.py - maybe the lower case T
confused me?  The bad news is this unit test fails with my patch, due to the
Bio.Translate module using an incredibly strict check on the alphabet.

I'll try and come up with a less invasive change to Bio.Data.CodonTable which
makes Bio.Translate happy again - but probably not tonight.

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