[Biopython-dev] [Bug 2508] NCBIStandalone.blastall: provide support for '-F F' and make it safe

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Jun 19 10:08:55 UTC 2008


------- Comment #4 from biopython-bugzilla at maubp.freeserve.co.uk  2008-06-19 06:08 EST -------
On the issue of the low-complexity filter, that is actually already supported
in NCBIStandalone.blastall(), NCBIStandalone.blastpgp() and
NCBIStandalone.rpsblast() using the optional argument 'filter'.  This is
described in the doc string too, although it doesn't use the phrase "low
complexity" which might be clearer.

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