[Biopython-dev] [Bug 2698] New: Attempt at a unit test for MaxEntrophy

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2698

           Summary: Attempt at a unit test for MaxEntrophy
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: enhancement
          Priority: P2
         Component: Unit Tests
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: bsouthey at gmail.com


I used test_LogisticRegression.py to develop a test for MaxEntrophy. However, I
could not get MaxEntrophy to train on that dataset. Indeed I have found it to
be very sensitive to both data and functions making it extremely hard to
develop bioinformatics-based data and associated test. So in the end I
generated data based on some of my work. 

I trained the model outside the tests because I do not know how to avoid
retraining the model for each test.


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