[Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Dec 12 21:48:03 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2390





------- Comment #19 from Biosql at hotmail.com  2007-12-12 16:48 EST -------
Hi Peter, 

I know it's been a very long time (more than a month), but I had this huge exam
to prepare. 

Anyway, I've tried the latest version and everything is working fine.

Many many thanks to you !

Since any Swiss Prot cross-references ain't uploaded in the Biosql DB, I've
tried to parse the flat file with the RecordParser method from SProt instead of
the SequenceParser or the SeqIO Parser, but I'm getting an error.

I've seen in the bug list that you seem to work on this issue.
Am I right ? If not, is there a way to upload the Swiss Prot cross-references ?

Again, thank you !  


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