[Biopython-dev] [Bug 1948] uniprot release 49/SProt.Record Parser Problem

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1948





------- Comment #6 from gould at embl.de  2006-02-15 09:37 -------
(In reply to comment #5)
> I have checked in a "short term fix" to the SwissProt parser, see
> Bio/SwissProt/SProt.py revision 1.32
> 
> If you want to test this, the simplest way is just backup your local copy of
> Bio/SwissProt/SProt.py and then replace it with the latest version from CVS via
> this URL:
> 
> http://cvs.biopython.org/cgi-bin/viewcvs/viewcvs.cgi/biopython/Bio/SwissProt/SProt.py?cvsroot=biopython
> 
> With this change BioPython will recognise the new style DT lines BUT WILL
> IGNORE THEM and carry on.
> 
> This should allow people to do any analysis they need to, as long as they don't
> need the date information.
> 
> I have logged bug 1956 to do something sensible with the new DT lines.
> 


Yes, I've checked that 'short term fix' and it works for me so thanks for your
help on that matter....




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